CDS

Accession Number TCMCG077C23759
gbkey CDS
Protein Id KAF5749015.1
Location join(6251880..6252106,6252704..6252887,6253112..6253209,6253958..6254063,6254340..6254557,6255097..6255139,6255245..6255498,6256211..6256625)
Organism Tripterygium wilfordii
locus_tag HS088_TW04G00976

Protein

Length 514aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA542587, BioSample:SAMN11634134
db_source JAAARO010000004.1
Definition E3 ubiquitin ligase complex SCF subunit sconB [Tripterygium wilfordii]
Locus_tag HS088_TW04G00976

EGGNOG-MAPPER Annotation

COG_category K
Description WD40 repeats
KEGG_TC -
KEGG_Module M00387        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko04121        [VIEW IN KEGG]
ko04131        [VIEW IN KEGG]
KEGG_ko ko:K10260        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04120        [VIEW IN KEGG]
map04120        [VIEW IN KEGG]
GOs GO:0000123        [VIEW IN EMBL-EBI]
GO:0000428        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003712        [VIEW IN EMBL-EBI]
GO:0003713        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005667        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006325        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006473        [VIEW IN EMBL-EBI]
GO:0006475        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009891        [VIEW IN EMBL-EBI]
GO:0009893        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010557        [VIEW IN EMBL-EBI]
GO:0010604        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016569        [VIEW IN EMBL-EBI]
GO:0016570        [VIEW IN EMBL-EBI]
GO:0016573        [VIEW IN EMBL-EBI]
GO:0016591        [VIEW IN EMBL-EBI]
GO:0016604        [VIEW IN EMBL-EBI]
GO:0016607        [VIEW IN EMBL-EBI]
GO:0018193        [VIEW IN EMBL-EBI]
GO:0018205        [VIEW IN EMBL-EBI]
GO:0018393        [VIEW IN EMBL-EBI]
GO:0018394        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0030880        [VIEW IN EMBL-EBI]
GO:0030914        [VIEW IN EMBL-EBI]
GO:0031248        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031325        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031328        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033276        [VIEW IN EMBL-EBI]
GO:0035770        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0036464        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043543        [VIEW IN EMBL-EBI]
GO:0043966        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044798        [VIEW IN EMBL-EBI]
GO:0045935        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051173        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051254        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0055029        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0061695        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070461        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090575        [VIEW IN EMBL-EBI]
GO:0140110        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1902493        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1902680        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1903508        [VIEW IN EMBL-EBI]
GO:1990234        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAATCAACATGTAATAACAAGACGATCCTGTGTTAATGAACGAGTTCGAGTCAACCAAATGGAGAAGACGACGTCCCGGAGTAGCTCGATTACCGATTTGGACGGTGACTCACTGGCTCACTGTGCCAGCTACCTTAGCCTCCAAGACCTCTCCAACATGGCCATGTCCTCCCGTTCCCTCAGACGCCTCGCTTACTCCGATTCCATCTGGCAACGCGTGTTCAGGGATCATTGGCCACAAGAAGTATCGTCCATCTCACCTCAGACAGGAATTAGGGAAGCATATTTAGCCAGGCGTACGGCAATGCTGCAGTTCAAATATCTCGATCCTTTCGTTGCTGACTTTTTTACGGATTCAAGACCTTGTGATCATATTCTCCTGGAAAATAATGACATTATCTTCTCCCAGGGTTCCTTTGTGCATATGGTGAACATCGACAGATTTTTAGGTGGAAATAGTTCGTTTGTCACACTAAGTGATCATAAAGCAAGAATTACTGGCATGAGATTGTTTCCGCTTAAAGAAACTTCTTTATTTCGAGGTGAGGCGCAACAAATGGAGAATGTTTTAGTGACCTCAAGCTGTGATCACTCCATTCGTTTATGGTGGAAGGGTTTGTGCCAACGATGTTTTAGAGGTCATAATGGCCCAGTGACTGCCTTGTCAGATAAGTTATTAGGTGAAGATAGTGACAAGGTTTTGGGTAGTGGTGGTGAAGATGGTACTGTTCGCCTTTGGTCACTCGGATCAAGTGGAAAACGTGGCCGGCATGCTTTGAAGGCTACTCTCTATGGACATGAGAAACCTGTCAAACTGATGTCGGTTGCCAGACACAAAACTTCCCTTCTGGTGACCATTTCAAAAGATTCCAAGGTTCGGGTTTGGGATACAAGTACCTCATCTGCTGTTCGTTCTTCATGCTGTGTGGGGATGACATCTGTGACTGGTGTACCAGTGGATATGAAGTGTCATGAGTCATTGCTTTATGTTGCTGCTGGTTCATCAGTTGTGACCGTTGATTTAAGGACGATGCAGAAAGTTGTTACTGCAGCAGTCTATCAACCTAAGTTGTGCTCTTTTGCAATTATGCCCTCAAAATCCTTGATCTGCACTGGTGGAAATAGCAAAGCCATGCTTTGGGATATTCGGAAAAACCAAGATAAACTGAAACCAGAACAAGTAGCCGAGCTGGATGGACATACAGGACCTGTGACGCTTTTGCACATGGATTCAAACAAAATAGTAACTGGAGGGCCCGATGACGTTTGTACTAATGTTTGGGAGGCTGACACTGGTAGACTGACAAACTCCCTCCTTTGCTTTTTTCTGGGGGAAGCAAGTGTTGGTGGTGGTTGTACATCCATGGCTGTAAGTGGAAGTAGAATTGTGACTGCTAGCTCAAGCATTGCTGAAGAAAATGGACTCTTACGCTACAGAGATTTCTCCAATGCTAGTTGTCCTGTTTTAAGTTCTGAAGATGAGCATGATTCCAAGTTTTGGAATCCACGGTCTTACAGCGACCCCGATAGCTCAGATTACTGA
Protein:  
MNQHVITRRSCVNERVRVNQMEKTTSRSSSITDLDGDSLAHCASYLSLQDLSNMAMSSRSLRRLAYSDSIWQRVFRDHWPQEVSSISPQTGIREAYLARRTAMLQFKYLDPFVADFFTDSRPCDHILLENNDIIFSQGSFVHMVNIDRFLGGNSSFVTLSDHKARITGMRLFPLKETSLFRGEAQQMENVLVTSSCDHSIRLWWKGLCQRCFRGHNGPVTALSDKLLGEDSDKVLGSGGEDGTVRLWSLGSSGKRGRHALKATLYGHEKPVKLMSVARHKTSLLVTISKDSKVRVWDTSTSSAVRSSCCVGMTSVTGVPVDMKCHESLLYVAAGSSVVTVDLRTMQKVVTAAVYQPKLCSFAIMPSKSLICTGGNSKAMLWDIRKNQDKLKPEQVAELDGHTGPVTLLHMDSNKIVTGGPDDVCTNVWEADTGRLTNSLLCFFLGEASVGGGCTSMAVSGSRIVTASSSIAEENGLLRYRDFSNASCPVLSSEDEHDSKFWNPRSYSDPDSSDY